In-vitro diagnostics

Scientific publications

Jahr Year	Titel/Autor:in Title/Author	Publikationstyp Publication Type
2024	A novel approach for in vivo DNA footprinting using short double-stranded cell-free DNA from plasma Müller, Jan; Hartwig, Christina; Sonntag, Mirko; Bitzer, Lisa; Adelmann, Christopher; Vainshtein, Yevhen; Glanz, Karolina; Decker, Sebastian O.; Brenner, Thorsten; Weber, Georg F.; Haeseler, Arndt von; Sohn, Kai	Zeitschriftenaufsatz Journal Article
2024	Suppression PCR-Based Selective Enrichment Sequencing for Pathogen and Antimicrobial Resistance Detection on Cell-Free DNA in Sepsis - A Targeted, Blood Culture-Independent Approach for Rapid Pathogen and Resistance Diagnostics in Septic Patients Sonntag, Mirko; Elgeti, Vanessa Kimberly; Vainshtein, Yevhen; Jenner, Lucca; Müller, Jan; Brenner, Thorsten; Decker, Sebastian; Sohn, Kai	Zeitschriftenaufsatz Journal Article
2024	Discrimination of pancreato-biliary cancer and pancreatitis patients by non-invasive liquid biopsy Hartwig, Christina; Müller, Jan; Klett, Hagen; Kouhestani, Dina; Mittelstädt, Anke; Anthuber, Anna; David, Paul; Brunner, Maximilian; Jacobsen, Anne; Glanz, Karolina; Swierzy, Izabela; Roßdeutsch, Lotta; Klösch, Bettina; Grützmann, Robert; Wittenberger, Timo; Sohn, Kai; Weber, Georg F.	Zeitschriftenaufsatz Journal Article
2024	Rich microbial and depolymerising diversity in Antarctic krill gut Möller, Lars; Vainshtein, Yevhen; Meyer, Bettina; Neidhardt, John; Eren, A. Murat; Sohn, Kai; Rabus, Ralf	Zeitschriftenaufsatz Journal Article
2024	Draft genome sequence of furan-degrading Rhodococcus erythropolis strain FUR100 Helbich, Steffen; Woiski, Christine; Dobslaw, Daniel; Gerl, Thomas; Vainshtein, Yevhen; Sohn, Kai; Engesser, Karl Heinrich	Zeitschriftenaufsatz Journal Article
2024	Homeostatic T helper 17 cell responses triggered by complex microbiota are maintained in ex vivo intestinal tissue slices Beneke, Valerie; Grieger, Klaudia Maria; Hartwig, Christina; Müller, Jan; Sohn, Kai; Blaudszun, André-René; Hilger, Nadja; Schaudien, Dirk; Fricke, Stephan; Braun, Armin; Sewald, Katherina; Hesse, Christina	Zeitschriftenaufsatz Journal Article
2023	IL-3 orchestrates ulcerative colitis pathogenesis by controlling the development and the recruitment of splenic reservoir neutrophils Bénard, Alan; Mittelstädt, Anke; Klösch, Bettina; Glanz, Karolina; Müller, Jan; Schoen, Janina; Nüse, Björn; Brunner, Maximilian; Naschberger, Elisabeth; Stürzl, Michael; Mattner, Jochen; Muñoz, L. E.; Sohn, Kai; Grützmann, Robert; Weber, Georg Ferdinand	Zeitschriftenaufsatz Journal Article
2023	Current Applications of Liquid Biopsy in Gastrointestinal Cancer Disease - from Early Cancer Detection to Individualized Cancer Treatment David, Paul; Mittelstädt, Anke; Kouhestani, Dina; Anthuber, Anna; Kahlert, Christoph; Sohn, Kai; Weber, Georg Ferdinand	Review
2023	From Gut to Blood: Spatial and Temporal Pathobiome Dynamics during Acute Abdominal Murine Sepsis Hartwig, Christina; Drechsler, Susanne; Vainshtein, Yevhen; Maneth, Madeline; Schmitt, Theresa; Ehling-Schulz, Monika; Osuchowski, Marcin Filip; Sohn, Kai	Zeitschriftenaufsatz Journal Article
2023	The 2‐methylpropene degradation pathway in Mycobacteriaceae family strains Helbich, Steffen; Barrantes, Israel; Anjos Borges, Luiz Gustavo dos; Pieper, Dietmar H.; Vainshtein, Yevhen; Sohn, Kai; Engesser, Karl‐Heinrich	Zeitschriftenaufsatz Journal Article
2023	Identification of two early blood biomarkers ACHE and CLEC12A for improved risk stratification of critically ill COVID-19 patients Kattner, Simone; Müller, Jan; Glanz, Karolina; Manoochehri, Mehdi; Sylvester, Caroline Hannelore; Vainshtein, Yevhen; Berger, Marc Moritz; Brenner, Thorsten; Sohn, Kai	Zeitschriftenaufsatz Journal Article
2022	Transcriptome-proteome compendium of the Antarctic krill (Euphausia superba) Möller, L.; Vainstein, Yevhen; Wöhlbrand, L.; Dörries, M.; Meyer, B.; Sohn, Kai; Rabus, R.	Zeitschriftenaufsatz Journal Article
2021	Next-generation sequencing diagnostics of bacteremia in pediatric sepsis Schmoch, T.; Westhoff, J.H.; Decker, S.O.; Skarabis, A.; Hoffmann, G.F.; Dohna-Schwake, C.; Felderhoff-Müser, U.; Skolik, C.; Feisst, M.; Klose, C.; Bruckner, T.; Luntz, S.; Weigand, M.A.; Sohn, K.; Brenner, T.	Zeitschriftenaufsatz Journal Article
2021	Presence of viremia during febrile neutropenic episodes in patients undergoing chemotherapy for malignant neoplasms Obrová, K.; Grumaz, Silke; Remely, M.; Czurda, S.; Krickl, I.; Herndlhofer, S.; Gleixner, K.V.; Sperr, W.R.; Größlinger, L.; Frank, T.; Andrade, N.; Egger-Matiqi, T.; Peters, C.; Engstler, G.; Dworzak, M.; Attarbaschi, A.; Grotel, M. van; Heuvel-Eibrink, M.M. van den; Moiseev, I.S.; Rogacheva, Y.; Zubarovskaya, L.; Zubarovskaya, N.; Pichler, H.; Lawitschka, A.; Koller, E.; Keil, F.; Valent, P.; Sohn, K.; Lion, T.	Zeitschriftenaufsatz Journal Article
2020	Draft Genome Sequence of Andreprevotia sp. Strain IGB-42, a Chitinolytic Bacterium Isolated from a Soil Sample of an Anthill in Stuttgart, Germany Vainshtein, Y.; Werner, Nicole; Kirstahler, Philipp; Glanz, K.; Grumaz, Christian; Hahn, T.; Zibek, S.; Sohn, K.	Zeitschriftenaufsatz Journal Article
2020	Rapid Next-Generation Sequencing - Based Diagnostics of Bacteremia in Septic Patients Grumaz, Christian; Hoffmann, A.; Vainshtein, Y.; Kopp, M.; Grumaz, Silke; Stevens, Philip; Decker, S.O.; Weigand, M.A.; Hofer, S.; Brenner, T.; Sohn, K.	Zeitschriftenaufsatz Journal Article
2019	New approaches for the detection of invasive fungal diseases in patients following liver transplantation - results of an observational clinical pilot study Decker, Sebastian O.; Krüger, Albert; Wilk, Henryk; Grumaz, Silke; Vainshtein, Yevhen; Schmitt, Felix C.F.; Uhle, Florian; Bruckner, Thomas; Zimmermann, Stefan; Mehrabi, Arianeb; Mieth, Markus; Weiss, Karl Heinz; Weigand, Markus A.; Hofer, Stefan; Sohn, Kai; Brenner, Thorsten	Zeitschriftenaufsatz Journal Article
2019	Stable Redox-Cycling Nitroxide Tempol Has Antifungal and Immune-Modulatory Properties Hosseinzadeh, A.; Stylianou, M.; Lopes, J.P.; Müller, D.C.; Häggman, A.; Holmberg, S.; Grumaz, Christian; Johansson, A.; Sohn, K.; Dieterich, C.; Urban, C.F.	Zeitschriftenaufsatz Journal Article
2019	Enhanced performance of next-generation sequencing diagnostics compared with standard of care microbiological diagnostics in patients suffering from septic shock Grumaz, Silke; Grumaz, Christian; Vainshtein, Yevhen; Stevens, Philip; Glanz, Karolina; Decker, Sebastian O.; Hofer, Stefan; Weigand, Markus A.; Brenner, Thorsten; Sohn, Kai	Zeitschriftenaufsatz Journal Article
2019	Obstructed defecation - an enteric neuropathy? An exploratory study of patient samples Kim, M.; Rosenbaum, C.; Schlegel, N.; Grumaz, Christian; Sohn, K.; Isbert, C.; Walles, Heike; Metzger, M.	Zeitschriftenaufsatz Journal Article
2018	Genetic repertoires of anaerobic microbiomes driving generation of biogas Grohmann, Anja; Vainshtein, Yevhen; Euchner, Ellen; Grumaz, Christian; Bryniok, Dieter; Rabus, Ralf; Sohn, Kai	Zeitschriftenaufsatz Journal Article
2018	Microbiome dynamics and adaptation of expression signatures during methane production failure and process recovery Grohmann, Anja; Fehrmann, S.; Vainshtein, Y.; Haag, N.L.; Wiese, F.; Stevens, Philip; Naegele, H.-J.; Oechsner, H.; Hartsch, T.; Sohn, K.; Grumaz, Christian	Zeitschriftenaufsatz Journal Article
2018	A novel cytochrome P450 mono-oxygenase from Streptomyces platensis resembles activities of human drug metabolizing P450s Worsch, Anne; Eggimann, Fabian K.; Girhard, Marco; Bühler, Clemens J. von; Tieves, Florian; Czaja, Rico; Vogel, Andreas; Grumaz, Christian; Sohn, Kai; Lütz, Stephan; Kittelmann, Matthas; Urlacher, Vlada B.	Zeitschriftenaufsatz Journal Article
2018	Localization and functional characterization of the pathogenesis-related proteins Rbe1p and Rbt4p in Candida albicans Bantel, Y.; Darwiche, Rabih; Rupp, Steffen; Schneiter, Roger; Sohn, Kai	Zeitschriftenaufsatz Journal Article
2018	Next-generation sequencing diagnostics of bacteremia in sepsis (Next GeneSiS-Trial): Study protocol of a prospective, observational, noninterventional, multicenter, clinical trial Brenner, Thorsten; Decker, Sebastian O.; Grumaz, Silke; Stevens, Philip; Bruckner, Thomas; Schmoch, Thomas; Pletz, Mathias W.; Bracht, Hendrik; Hofer, Stefan; Marx, Gernot; Weigand, Markus A.; Sohn, Kai	Zeitschriftenaufsatz Journal Article
2017	Dual transcriptome of the immediate neutrophil and Candida albicans interplay Niemiec, M.J.; Grumaz, Christian; Ermert, D.; Desel, C.; Shankar, M.; Lopes, J.P.; Mills, I.G.; Stevens, Philip; Sohn, K.; Urban, C.F.	Zeitschriftenaufsatz Journal Article
2017	Draft genome sequence of Pseudonocardia autotrophica strain DSM 43083, an efficient producer of peroxidases for lignin modification Grumaz, Christian; Rais, Dominik; Kirstahler, Philipp; Vainshtein, Yevhen; Rupp, Steffen; Zibek, Susanne; Sohn, Kai	Zeitschriftenaufsatz Journal Article
2017	The molecular blueprint of a fungus by next-generation sequencing (NGS) Grumaz, Christian; Kirstahler, Philipp; Sohn, Kai	Aufsatz in Buch Book Article
2017	Correction to: Dual transcriptome of the immediate neutrophil and Candida albicans interplay Niemiec, M.J.; Grumaz, Christian; Ermert, D.; Desel, C.; Shankar, M.; Lopes, J.P.; Mills, I.G.; Stevens, Philip; Sohn, K.; Urban, C.F.	Zeitschriftenaufsatz Journal Article
2017	Immune cell-supplemented human skin model for studying fungal infections Kühbacher, Andreas; Sohn, Kai; Burger-Kentischer, Anke; Rupp, Steffen	Aufsatz in Buch Book Article
2017	Antifungal defense of probiotic Lactobacillus rhamnosus GG is mediated by blocking adhesion and nutrient depletion Mailänder-Sánchez, D.; Braunsdorf, C.; Grumaz, Christian; Müller, C.; Lorenz, Stefan; Stevens, Philip; Wagener, J.; Hebecker, B.; Hube, B.; Bracher, F.; Sohn, K.; Schaller, M.	Zeitschriftenaufsatz Journal Article
2017	Immune-response patterns and next generation sequencing diagnostics for the detection of mycoses in patients with septic shock - results of a combined clinical and experimental investigation Decker, S.O.; Sigl, A.; Grumaz, Christian; Stevens, Philip; Vainshtein, Y.; Zimmermann, S.; Weigand, M.A.; Hofer, S.; Sohn, K.; Brenner, T.	Zeitschriftenaufsatz Journal Article
2017	Method and device for nucleic acid based diagnostic approaches including the determination of a deviant condition, especially a health condition and/or pathogenic condition of a sample Stevens, Philip; Sohn, Kai; Grumaz, Silke; Haeseler, Arndt von	Patent
2017	Central role for dermal fibroblasts in skin model protection against Candida albicans Kühbacher, Andreas; Henkel, H.; Stevens, Philip; Grumaz, Christian; Finkelmeier, D.; Burger-Kentischer, A.; Sohn, K.; Rupp, S.	Zeitschriftenaufsatz Journal Article
2017	Draft genome sequences of three Actinobacteria strains presenting new candidate organisms with high potentials for specific P450 cytochromes Grumaz, Christian; Vainshtein, Y.; Kirstahler, Philipp; Luetz, S.; Kittelmann, M.; Schroer, K.; Eggimann, F.K.; Czaja, R.; Vogel, A.; Hilberath, T.; Worsch, A.; Girhard, M.; Urlacher, V.B.; Sandberg, M.; Sohn, K.	Zeitschriftenaufsatz Journal Article
2016	Transcriptomics and physiological analyses reveal co-ordinated alteration of metabolic pathways in Jatropha curcas drought tolerance Sapeta, Helena; Lourenco, Tiago; Lorenz, Stefan; Grumaz, Christian; Kirstahler, Philipp; Barros, Pedro M.; Costa, Joaquim Miguel; Sohn, Kai; Oliveira, M. Margarida	Zeitschriftenaufsatz Journal Article
2016	A method to identify protein antigens of Dermanyssus gallinae for the protection of birds from poultry mites Makert, Gustavo R.; Vorbrüggen, Susanne; Krautwald-Junghanns, Maria-Elisabeth; Voss, Matthias; Sohn, Kai; Buschmann, Tilo; Ulbert, Sebastian	Zeitschriftenaufsatz Journal Article
2016	Advanced green biorefining: Effects of ensiling treatments on lactic acid production, microbial activity and supplementary methane formation of grass and rye Haag, Nicola Leonard; Grumaz, Christian; Wiese, Franziska; Kirstahler, Philipp; Merkle, Wolfgang; Nägele, Hans-Joachim; Sohn, Kai; Jungbluth, Thomas; Oechsner, Hans	Zeitschriftenaufsatz Journal Article
2016	Next-generation sequencing diagnostics of bacteremia in septic patients Grumaz, Silke; Stevens, Philip; Grumaz, Christian; Decker, Sebastian O.; Weigand, Markus A.; Hofer, Stefan; Brenner, Thorsten; Haeseler, Arndt von; Sohn, Kai	Zeitschriftenaufsatz Journal Article
2015	Transcriptomic profiling of Pseudozyma aphidis during mannosylerythritol lipid synthesis Günther, Michael; Grumaz, Christian; Lorenz, Stefan; Stevens, Philip; Lindemann, Elena; Hirth, Thomas; Sohn, Kai; Zibek, Susanne; Rupp, Steffen	Zeitschriftenaufsatz Journal Article
2015	Draft genome sequence of Amantichitinum ursilacus IGB-41, a new chitin-degrading bacterium Kirstahler, Philipp; Günther, Michael; Grumaz, Christian; Lindemann, Elena; Rupp, Steffen; Zibek, Susanne; Sohn, Kai	Zeitschriftenaufsatz Journal Article
2015	The transcriptomic profile of Pseudozyma aphidis during production of mannosylerythritol lipids Günther, Michael; Grumaz, Christian; Lorenz, Stefan; Stevens, Philip; Lindemann, Elena; Hirth, Thomas; Sohn, K.; Zibek, S.; Rupp, S.	Zeitschriftenaufsatz Journal Article
2015	Anaerobe Batch-Fermentation mit Mais- und Amaranthsilagen: Biogasproduktion und molekulare Charakterisierung mikrobieller Gemeinschaften Kempter-Regel, Brigitte; Grumaz, Christian; Wiese, Franziska; Scherge, Katharina; Birk, Carolin; Schließmann, Ursula; Stevens, Philip; Sohn, Kai; Bryniok, Dieter	Konferenzbeitrag Conference Paper
2015	Stoffwechselanalysen in komplexen mikrobiellen Biozönosen Stevens, Philip; Grumaz, Christian; Wiese, F.; Sohn, K.	Zeitschriftenaufsatz Journal Article
2014	An in vivo photo-cross-linking approach reveals a homodimerization domain of Aha1 in S. cerevisiae Berg, M.; Michalowski, A.; Palzer, Silke; Rupp, S.; Sohn, K.	Zeitschriftenaufsatz Journal Article
2014	Genome sequence of the basidiomycetous fungus Pseudozyma aphidis DSM70725, an efficient producer of biosurfactant mannosylerythritol lipids Lorenz, Stefan; Günther, Michael; Grumaz, Christian; Rupp, Steffen; Zibek, Susanne; Sohn, Kai	Zeitschriftenaufsatz Journal Article
2013	Characterization of the protective and immunregulatory activity of probiotic lactobacilli in mucosal Candidiasis Mailander-Sanchez, D.; Wagener, J.; Braunsdorf, C.; Grumaz, Christian; Lorenz, S.; Sohn, K.; Wehkamp, J.; Schaller, M.	Konferenzbeitrag Conference Paper
2013	A family of secreted pathogenesis-related proteins in Candida albicans Röhm, M.; Lindemann, Elena; Hiller, Ekkehard; Ermert, D.; Lemuth, Karin; Trkulja, D.; Sogukpinar, O.; Brunner, H.; Rupp, S.; Urban, C.F.; Sohn, K.	Zeitschriftenaufsatz Journal Article
2013	Species and condition specific adaptation of the transcriptional landscapes in Candida albicans and Candida dubliniensis Grumaz, Christian; Lorenz, Stefan; Stevens, Philip; Lindemann, Elena; Schock, U.; Retey, J.; Rupp, S.; Sohn, K.	Zeitschriftenaufsatz Journal Article
2013	Metatranscriptome analysis reveals new insights in probiotic/host/Candida interaction in oral Candidiasis Mailander-Sanchez, D.; Wagener, J.; Braunsdorf, C.; Grumaz, Christian; Lorenz, S.; Sohn, K.; Schaller, M.	Konferenzbeitrag Conference Paper
2013	An expanded genetic code in Candida albicans to study protein-protein interactions in vivo Palzer, Silke; Bantel, Y.; Kazenwadel, F.; Berg, M.; Rupp, S.; Sohn, K.	Zeitschriftenaufsatz Journal Article
2012	Differential metatranscriptomic profiling during Candida infections Grumaz, Christian; Hoffmann, H.; Lorenz, Stefan; Lindemann, Elena; Stevens, Philip; Rupp, S.; Sohn, K.	Zeitschriftenaufsatz Journal Article
2012	An expanded genetic code in Candida albicans to study molecular interactions in vivo Palzer, Silke; Bantel, Y.; Kazenwadel, F.; Berg, M.; Rupp, S.; Sohn, K.	Zeitschriftenaufsatz Journal Article
2012	Highly-integrated lab-on-chip system for point-of-care multiparameter analysis Schumacher, Soeren; Nestler, Jörg; Otto, Thomas; Wegener, Michael; Ehrentreich-Förster, Eva; Michel, Dirk; Wunderlich, Kai; Palzer, Silke; Sohn, Kai; Weber, Achim; Burgard, Matthias; Grzesiak, Andrzej; Teichert, Andreas; Brandenburg, Albrecht; Koger, Birgit; Albers, Jörg; Nebling, Eric; Bier, Frank F.	Zeitschriftenaufsatz Journal Article
2011	Adaptation, adhesion and invasion during interaction of Candida albicans with the host. Focus on the function of cell wall proteins Hiller, Ekkehard; Zavrel, M.; Hauser, N.C.; Sohn, K.; Burger-Kentischer, A.; Lemuth, Karin; Rupp, S.	Zeitschriftenaufsatz Journal Article
2010	A multidimensional electrophoretic system of separation for the analysis of gene expression (MESSAGE) Lindemann, Elena; Rohde, B.; Rupp, S.; Regenbogen, J.; Sohn, K.	Zeitschriftenaufsatz Journal Article
2009	Characterization of genes encoding for cell surface proteins induced during hostpathogen interaction Zavrel, M.; Hernandez, R.; Sohn, K.; Hauser, N.; Rupp, S.	Konferenzbeitrag Conference Paper
2009	Human epithelial model systems for the study of Candida infections in vitro. Pt.I: Adhesion to epithelial models Sohn, K.; Rupp, S.	Aufsatz in Buch Book Article
2009	Host-pathogen interactions	Sammelband Anthology
2008	Organotypical tissue cultures from adult murine colon as an in vitro model of intestinal mucosa Bareiss, P.M.; Metzger, M.; Sohn, K.; Rupp, S.; Frick, J.S.; Autenrieth, I.B.; Lang, F.; Schwarz, H.; Skutella, T.; Just, L.	Zeitschriftenaufsatz Journal Article
2007	A novel conserved nuclear localization signal is recognized by a group of yeast importins Fries, T.; Betz, C.; Sohn, K.; Caesar, S.; Schlenstedt, G.; Bailer, S.	Zeitschriftenaufsatz Journal Article
2006	Verbessertes elektrophoretisches Trennverfahren fuer die Analyse der Genexpression Sohn, Kai; Rupp, S.	Patent
2006	Getting in touch with Candida albicans: The cell wall of a fungal pathogen Sohn, K.; Schwenk, J.; Urban, C.F.; Lechner, J.; Schweikert, M.; Rupp, S.	Zeitschriftenaufsatz Journal Article
2006	An in vitro assay to study the transcriptional response during adherence of Candida albicans to different human epithelia Sohn, K.; Senyürek, I.; Fertey, J.; Königsdorfer, A.; Joffroy, C.; Hauser, N.C.; Zelt, G.; Brunner, H.; Rupp, S.	Zeitschriftenaufsatz Journal Article
2006	Controlled cell attachment, using plasma deposited polymer microstructures: A novel study of cells-substrate interactions Sciarratta, V.; Sohn, K.; Burger-Kentischer, A.; Brunner, H.; Oehr, Christian	Aufsatz in Buch Book Article
2006	Universelles Verfahren für die Genexpressionsanalyse Lindemann, Elena; Rupp, S.; Sohn, K.	Zeitschriftenaufsatz Journal Article
2005	Thioredoxin-Peroxidase von C. albicans als virulenzspezifischer Marker Urban, C.; Sohn, Kai; Brunner, H.; Rupp, S.	Patent
2005	Identification and Characterization of Cor33p, a novel protein implicated in tolerance towards oxidative stress in Candida albicans Sohn, K.; Röhm, M.; Urban, C.F.; Saunders, N.; Rothenstein, D.; Lottspeich, F.; Schröppel, K.; Rupp, S.	Zeitschriftenaufsatz Journal Article
2005	The moonlighting protein Tsa1p is implicated in oxidative stress response and in cell wall biogenesis in Candida albicans Urban, C.F.; Sohn, K.; Schröppel, K.; Brunner, H.; Rupp, S.	Zeitschriftenaufsatz Journal Article
2005	The transcriptional response in C. albicans during adhesion to mammalian epithelia Sohn, K.; Senyürek, I.; Hauser, N.; Zelt, G.; Brunner, H.; Rupp, S.	Konferenzbeitrag Conference Paper
2005	Identification of covalently-linked proteins in the cell wall of C. albicans Hiller, E.; Sohn, K.; Urban, Constantin; Gnau, V.; Nordheim, A.; Brunner, H.; Rupp, S.	Konferenzbeitrag Conference Paper
2004	RBR1, a novel pH-regulated cell wall gene of Candida albicans, is repressed by RIM101 and activated by NRG1 Lotz, H.; Sohn, K.; Brunner, H.; Mühlschlegel, F.A.; Rupp, S.	Zeitschriftenaufsatz Journal Article
2003	Identification of cell surface determinants in Candida albicans reveals Tsa1p, a protein differentially localized in the cell Urban, C.F.; Sohn, K.; Lottspeich, F.; Brunner, H.; Rupp, S.	Zeitschriftenaufsatz Journal Article
2003	EFG1 is a major regulator of cell wall dynamics in Candida albicans as revealed by DNA microarrays Sohn, K.; Urban, C.F.; Brunner, H.; Rupp, S.	Zeitschriftenaufsatz Journal Article
2003	Identification of cell surface determinants in Candida albicans Urban, C.F.; Sohn, K.; Lottspeich, F.; Schweikert, M.; Brunner, H.; Rupp, S.	Zeitschriftenaufsatz Journal Article
2003	Biochips mit Dimorphismus-spezifischen Faktoren aus Candida albicans Sohn, Kai; Rupp, S.; Brunner, H.	Patent
2001	Regulation of cell wall dynamics in Candida albicans by CPH1 and EFG1, two transcription factors essential for virulence Sohn, Kai; Urban, Constantin; Brunner, Herwig; Rupp, Steffen	Konferenzbeitrag Conference Paper
2001	Hyphenspezifische Faktoren aus Candida albicans Rupp, S.; Johannes, F.; Sohn, Kai	Patent
2000	Localization and topology of ratp28, a member of a novel family of putative steroid-binding proteins Nölte, I.; Jeckel, D.; Wieland, F.T.; Sohn, K.	Zeitschriftenaufsatz Journal Article
2000	A microarray enzyme-linked immunosorbent assay for autoimmune diagnostics Joos, T.O.; Schrenk, M.; Hopfl, P.; Kroger, K.; Chowdhury, U.; Stoll, D.; Schnorer, D.; Durr, M.; Herick, K.; Rupp, S.; Sohn, K.; Hammerle, H.	Zeitschriftenaufsatz Journal Article

Diese Liste ist ein Auszug aus der Publikationsplattform Fraunhofer-Publica

This list has been generated from the publication platform Fraunhofer-Publica

Sequencing with lllumina NextSeq 2000	Read length	Reads/ Flowcell	Capacity/ Flowcell	Advantages
High output run mode	2 x 150 bases	1,1 bn	330 gb	Universally applicable, high throughput
Rapid run mode	2 x 150 bases	400 Mio	120 gb	Rapid data delivery time

Tabbed contents

Our research

Fields of activity and technologies

From wet lab to dry lab: Functional genomics via next-generation sequencing

Next-generation diagnostics

Precision diagnostics of microbial resistance and environmental monitoring of resistance development

Genomics for white and environmental biotechnology

services

Next Generation Sequencing Services

From wet lab to dry lab – complete sample analysis

Individual offer

equipment

Equipment

QIAcube (Qiagen)

Axio Observer.Z1 microscope (Zeiss)

BioAnalyzer 2100 (Agilent)

Biomek Fx (Beckman Coulter)

GS Junior (Roche)

HiSeq2500 (Illumina)

HPC

Sample preparations

Established NGS-technologies

publications

Information materials

Brochure “Next-Generation Sequencing”

Poster

Scientific publications

projects

Reference projects

Genomics for environmental biotechnology

White biotechnology

Synthetic biology

Contact Press / Media

Dr. Kai Sohn